Neurotoxins. Both shortchain and long-chain neurotoxins exhibit equi-potency towards muscle abcd

Neurotoxins. Both shortchain and long-chain neurotoxins exhibit equi-potency towards muscle abcd nAChR [56,60] but only long-chain neurotoxins, not short-chain neurotoxins, bind to neuronal a7 nAChR with high affinity [61,62]. Detailed structure-function studies indicate that the presence of the fifth disulfide bond in loop II enables longchain neurotoxins to recognize a7 nAChR. The short helical segment formed by the fifth disulfide is thought to be 842-07-9 supplier crucial for the target receptor recognition [62,63]. Thus, size and conformation of the loops indeed affects the interaction of neurotoxins with their receptor. Similarly, structures of loop I in fasciculin [64], and loop III in FS2 [65] and dendroaspin [66] have distinct conformations. Hence, subtle conformational differences in the loops of 3FTxs may help in identifying putative functions. Hemachatoxin shows highest similarity to P-type cardiotoxins [67] (Figure 2A). Similar to these P-type cardiotoxins, hemachatoxin has the conserved Pro31 and cytolytic site. The threedimensional structure is similar to P-type cardiotoxins (Figure 4B) ?(RMSD values, 0.8 to 2.1 A for 58 to 60 Ca atoms; Z score values, 12.2 to 9.8). Besides, hemachatoxin shows considerable purchase Rubusoside structural identity with S-type cardiotoxins (RMSD 1.1 to 2.8 for 58 to 59 Ca atoms; Z score values, 10.5 to 6.3) (data not shown). However, the similarity with other groups of 3FTxs, such as neurotoxins, muscarinic toxins, fasciculin, FS2 or dendroaspin, is relatively low (Figure 2B, Table 2). The P-type cardiotoxins bind to phospholipids and perturb the membrane surface with their lipid binding sites (6?3, 24?7 and 46?0 amino acid positions in the tip of loop I, II and III, respectively) [67?9]. These hydrophobic residues flanked by cationic residues form cytolytic region inHemachatoxin from Ringhals Cobra VenomTable 1. Crystallographic data and refinement statistics.Data collection* ?Unit Cell (A) ?Resolution range (A) ?Wavelength (A) Observed reflections Unique reflections Completeness ( ) Redundancyaa = 49.7, b = 50.1, c = 57.8 50-2.43 (2.47-2.43) 1.5418 28936 5614 96.2 (84.5) 3.9 (3.7) 0.06 (0.17) 20.6 (11.7)loops of hemachatoxin with other 3FTxs suggests that hemachatoxin has structural features similar to the well characterized cardiotoxins. The structural analysis combined with literature predicts hemachatoxin to have cardiotoxic/cytotoxic properties. Additional experiments are required to fully characterize the activity of hemachatoxin.Materials and Methods Protein PurificationLyophilized H. haemachatus crude venom was purchased from South African Venom Suppliers (Louis Trichardt, South Africa). Size-fractionation of the crude venom (100 mg in 1 ml of distilled water) was carried out on a Superdex 30 gel-filtration column (1.6660 cm) pre-equilibrated 1527786 with 50 mM Tris-HCl buffer (pH 7.4). The proteins were eluted with the same buffer using ?an AKTA purifier system (GE Healthcare, Uppsala, Sweden). Peak 3 from the gel-filtration chromatography was sub-fractionated by reverse phase igh performance liquid chromatography (RP-HPLC) on a Jupiter C18 column (106250 mm) equilibrated with solvent A (0.1 TFA). The bound proteins were eluted using a linear gradient of 28?0 solvent B (80 acetonitrile in 0.1 TFA). The mass of each fraction were analyzed on a LCQ FleetTM Ion Trap LC/MS system (Thermo Scientific, San Jose, USA). XcaliburTM 2.1 and ProMass deconvolution 2.8 software were used, respectively, to analyze and deconvolute the ra.Neurotoxins. Both shortchain and long-chain neurotoxins exhibit equi-potency towards muscle abcd nAChR [56,60] but only long-chain neurotoxins, not short-chain neurotoxins, bind to neuronal a7 nAChR with high affinity [61,62]. Detailed structure-function studies indicate that the presence of the fifth disulfide bond in loop II enables longchain neurotoxins to recognize a7 nAChR. The short helical segment formed by the fifth disulfide is thought to be crucial for the target receptor recognition [62,63]. Thus, size and conformation of the loops indeed affects the interaction of neurotoxins with their receptor. Similarly, structures of loop I in fasciculin [64], and loop III in FS2 [65] and dendroaspin [66] have distinct conformations. Hence, subtle conformational differences in the loops of 3FTxs may help in identifying putative functions. Hemachatoxin shows highest similarity to P-type cardiotoxins [67] (Figure 2A). Similar to these P-type cardiotoxins, hemachatoxin has the conserved Pro31 and cytolytic site. The threedimensional structure is similar to P-type cardiotoxins (Figure 4B) ?(RMSD values, 0.8 to 2.1 A for 58 to 60 Ca atoms; Z score values, 12.2 to 9.8). Besides, hemachatoxin shows considerable structural identity with S-type cardiotoxins (RMSD 1.1 to 2.8 for 58 to 59 Ca atoms; Z score values, 10.5 to 6.3) (data not shown). However, the similarity with other groups of 3FTxs, such as neurotoxins, muscarinic toxins, fasciculin, FS2 or dendroaspin, is relatively low (Figure 2B, Table 2). The P-type cardiotoxins bind to phospholipids and perturb the membrane surface with their lipid binding sites (6?3, 24?7 and 46?0 amino acid positions in the tip of loop I, II and III, respectively) [67?9]. These hydrophobic residues flanked by cationic residues form cytolytic region inHemachatoxin from Ringhals Cobra VenomTable 1. Crystallographic data and refinement statistics.Data collection* ?Unit Cell (A) ?Resolution range (A) ?Wavelength (A) Observed reflections Unique reflections Completeness ( ) Redundancyaa = 49.7, b = 50.1, c = 57.8 50-2.43 (2.47-2.43) 1.5418 28936 5614 96.2 (84.5) 3.9 (3.7) 0.06 (0.17) 20.6 (11.7)loops of hemachatoxin with other 3FTxs suggests that hemachatoxin has structural features similar to the well characterized cardiotoxins. The structural analysis combined with literature predicts hemachatoxin to have cardiotoxic/cytotoxic properties. Additional experiments are required to fully characterize the activity of hemachatoxin.Materials and Methods Protein PurificationLyophilized H. haemachatus crude venom was purchased from South African Venom Suppliers (Louis Trichardt, South Africa). Size-fractionation of the crude venom (100 mg in 1 ml of distilled water) was carried out on a Superdex 30 gel-filtration column (1.6660 cm) pre-equilibrated 1527786 with 50 mM Tris-HCl buffer (pH 7.4). The proteins were eluted with the same buffer using ?an AKTA purifier system (GE Healthcare, Uppsala, Sweden). Peak 3 from the gel-filtration chromatography was sub-fractionated by reverse phase igh performance liquid chromatography (RP-HPLC) on a Jupiter C18 column (106250 mm) equilibrated with solvent A (0.1 TFA). The bound proteins were eluted using a linear gradient of 28?0 solvent B (80 acetonitrile in 0.1 TFA). The mass of each fraction were analyzed on a LCQ FleetTM Ion Trap LC/MS system (Thermo Scientific, San Jose, USA). XcaliburTM 2.1 and ProMass deconvolution 2.8 software were used, respectively, to analyze and deconvolute the ra.